Survival-associated meQTLs across different cancer types
We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs61843381 | chr10:43392024 | A/T | 5.62E-6 | 287 | 25.7 | 24.57 | 16.12 | KM Plot |
| KIRP | rs61843382 | chr10:43392076 | C/T | 4.42E-5 | 288 | 25.82 | 23.63 | 11.43 | KM Plot |
| KIRP | rs61843406 | chr10:43412711 | T/C | 4.98E-5 | 287 | 25.93 | 25.5 | 11.43 | KM Plot |
| KIRP | rs61843407 | chr10:43412858 | T/C | 4.98E-5 | 287 | 25.93 | 25.5 | 11.43 | KM Plot |
| KIRP | rs61843408 | chr10:43414838 | T/C | 4.98E-5 | 287 | 25.93 | 25.5 | 11.43 | KM Plot |
| KIRP | rs61843409 | chr10:43416252 | G/T | 4.98E-5 | 287 | 25.93 | 25.5 | 11.43 | KM Plot |
| KIRP | rs61843410 | chr10:43418655 | C/G | 4.94E-5 | 288 | 25.93 | 24.57 | 11.43 | KM Plot |
| KIRP | rs61843419 | chr10:43421715 | C/A | 4.94E-5 | 288 | 25.93 | 24.57 | 11.43 | KM Plot |
| KIRP | rs61843420 | chr10:43424504 | T/G | 5.03E-5 | 287 | 25.93 | 25.5 | 11.43 | KM Plot |
| KIRP | rs61843421 | chr10:43426232 | C/T | 5.03E-5 | 287 | 25.93 | 25.5 | 11.43 | KM Plot |
| KIRP | rs61843427 | chr10:43428377 | A/T | 4.81E-5 | 288 | 25.78 | 25.5 | 11.43 | KM Plot |
| KIRP | rs61843429 | chr10:43428566 | C/T | 4.81E-5 | 288 | 25.78 | 25.5 | 11.43 | KM Plot |
| KIRP | rs61843437 | chr10:43434032 | C/T | 4.83E-5 | 287 | 25.78 | 25.95 | 11.43 | KM Plot |
| KIRP | rs61843438 | chr10:43434864 | C/T | 4.83E-5 | 287 | 25.78 | 25.95 | 11.43 | KM Plot |
| KIRP | rs61843441 | chr10:43435672 | G/A | 4.83E-5 | 287 | 25.78 | 25.95 | 11.43 | KM Plot |